[ Info: Changing directory to /path>/.julia/packages/MPI/U5ujD/deps/build [ Info: Attempting to create directory /home/CCIPL//.julia/packages/MPI/U5ujD/deps/build Installing: /path>/.julia/packages/MPI/U5ujD/deps/usr/lib/libjuliampi.so Installing: /path>/.julia/packages/MPI/U5ujD/deps/src/./compile-time.jl Linking Fortran shared library libjuliampi.so Building Fortran object CMakeFiles/juliampi.dir/test_ Building C object CMakeFiles/juliampi.dir/juliampi.c.o Scanning dependencies of target mpijl-build usr/bin/ld: warning: libgfortran.so.4, needed by /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/lib/libmpifort.so, Linking Fortran executable gen_constants Building Fortran object CMakeFiles/gen_constants.dir/gen_ Scanning dependencies of target gen_constants Building C object CMakeFiles/gen_functions.dir/gen_functions.c.o Scanning dependencies of target gen_functions Build files have been written to: //.julia/packages/MPI/U5ujD/deps/build Detecting Fortran/C Interface - Found GLOBAL and MODULE mangling Found MPI_Fortran: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpif90 (found version "3.1") Found MPI_C: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpicc (found version "3.1") Found Git: /trinity/shared/apps/cv-standard/git/2.16.1/bin/git (found version "2.16.1") Check for working C compiler: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpicc - works Check for working C compiler: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpicc Checking whether /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpif90 supports Fortran 90 - yes Checking whether /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpif90 supports Fortran 90 Detecting Fortran compiler ABI info - done Check for working Fortran compiler: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpif90 - works Check for working Fortran compiler: /trinity/shared/apps/ccipl/machine-dependant/nazare-dc/soft/mvapich2/psm2/gcc72/2.2.3b/bin/mpif90 The C compiler identification is GNU 8.1.0 Updating `~/.julia/environments/v0.7/Manifest.toml`īuilding MPI → `~/.julia/packages/MPI/U5ujD/deps/build.log`īuild.log is : - The Fortran compiler identification is GNU 8.1.0 Updating `~/.julia/environments/v0.7/Project.toml` I get the build MPI done, with gcc/gfortran version 8.1.0 instead of the old ones of the system.
So I fix FC and CC as you do and it works better. However, I notice that I can’t make usage of ‘module loaded’ recent version of gcc, It takes /usr/bin/gcc ! If I look at the build.log file, everything seems to be OK, no warning or error message. compilecache(::Base.PkgId, ::String) at. In expression startiing at //.julia/packages/MPI/U5ujD/src/MPI.jl:20ĮRROR: Failed to precompile MPI to //.julia/compiled/v0.7/MPI/nO0XF.ji. In expression starting at //.julia/packages/MPI/U5ujD/src/mpi-base.jl:73 include(::String) at //.julia/packages/MPI/U5ujD/src/MPI.jl:3 Updating ~/.julia/environments/v0.7/Manifest.tomlīuilding MPI → ~/.julia/packages/MPI/U5ujD/deps/build.logĮRROR: LoadError: LoadError: UndefVarError: MPI_COMM_NULL not defined Updating ~/.julia/environments/v0.7/Project.toml Updating registry at ~/.julia/registries/General | | | | | | | (| | | Version 0.7.0 ( 06:46 UTC)Ĭloning default registries into //.julia/registries Julia _ _ _ _(_)_ | A fresh approach to technical computing (_) | (_) (_) | Documentation: _ _ _| |_ _ _ | Type "?" for help, "]?" for Pkg help.
#How to install mpi on centos 64 bits
I have installed Linux 64 bits binary versions of julia 0.7.0 and 1.0.1 So, I have to install MPI.jl module for one of our users. MPE releases are available here.I’m new to Julia.
#How to install mpi on centos code
Otherwise you can use the installation guide for installing MPICH from the source code below. If available for your platform, this is likely the easiest installation method since it automatically checks for dependency packages and installs them. For example, you can search for it using “yum” (on Fedora), “apt” (Debian/Ubuntu), “pkg_add” (FreeBSD) or “port”/”brew” (Mac OS). NOTE: MPICH binary packages are available in many UNIX distributions and for Windows. Downloads MPICH is distributed under a BSD-like license.